The ATP binding RNA Aptamer


1) Highlight the Bound AMP

2) Highlight G8, A12, U16 interacting with AMP

3) Highlight G.C base pairs (G7.G11 , G17.G30)

4) Highlight GNRA motif (G8, A9, A10.AMP) and Linker in white ( A13, A14, C15)

5) Highlight the stems

6) View of the core of the Aptamer (nt 6-18, 29-31, AMP)

7) View GNRA motif tetraloop References
"Solution Structure of an Atp_binding RNA aptamer reveals a novel fold", T.Dieckman, E. Suzuki, G.K. Nkamura, and Juli Feigon RNA (1996) 2:628-640

PDB CODE=1RAW